SMTL ID : 7ul2.1

CryoEM Structure of Inactive NTSR1 Bound to SR48692 and Nb6

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

1 x Q6Q: 2-[[1-(7-chloranylquinolin-4-yl)-5-(2,6-dimethoxyphenyl)pyrazol-3-yl]carbonylamino]adamantane-2-carboxylic acid(Non-covalent)

Q6Q.1: 11 residues within 4Å: Chain A: I.257, R.323, M.326, F.327, I.330, W.335, Y.340, Y.343, H.344, F.346, Y.347 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:I.257, A:M.326, A:F.327, A:F.327, A:F.327, A:F.327, A:W.335, A:Y.343 Hydrogen bonds: A:R.323 Water bridges: A:R.323, A:R.324 Salt bridges: A:R.323 pi-Stacking: A:Y.347 Halogen bonds: A:Y.340

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 4 residues within 4Å: Chain A: L.128, S.131, D.132, T.175 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.132

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Robertson, M.J. et al., Structure determination of inactive-state GPCRs with a universal nanobody. Nat.Struct.Mol.Biol. (2022)

Release Date

2022-06-29

Peptides

Neurotensin receptor 1: A
Nanobody 6: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
R

B
D

Membrane

We predict this structure to be a membrane protein.
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Neurotensin receptor 1

Nanobody 6

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