SMTL ID : 7up6.1

Crystal structure of C-terminal domain of MSK1 in complex with in covalently bound literature RSK2 inhibitor pyrrolopyrimidine cyanoacrylamide compound 25 (co-crystal)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x SUU: (E)-3-(3-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)phenyl)-2-cyanoacrylamide bound form(Non-covalent)

SUU.1: 17 residues within 4Å: Chain A: L.20, G.21, E.22, G.23, S.26, I.27, C.28, A.41, K.43, V.70, M.86, E.87, L.88, L.89, L.139, I.152, D.153 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.20, A:L.139, A:I.152 Hydrogen bonds: A:G.23, A:S.26, A:E.87, A:L.89, A:D.153 Water bridges: A:D.153

2 x OXM: OXAMIC ACID(Non-covalent)

OXM.2: 3 residues within 4Å: Chain A: K.160, P.161 Ligands: OXM.3 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.160 OXM.3: 4 residues within 4Å: Chain A: Q.54, K.55, T.58 Ligands: OXM.2 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.58

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hall, A. et al., Discovery and Characterization of a Novel Series of Chloropyrimidines as Covalent Inhibitors of the Kinase MSK1. Acs Med.Chem.Lett. (2022)

Release Date

2022-08-31

Peptides

Ribosomal protein S6 kinase alpha-5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ribosomal protein S6 kinase alpha-5

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