SMTL ID : 7uqm.1

Pathogenesis related 10-10 papaverine complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

2 x EV1: 1-(3,4-DIMETHOXYBENZYL)-6,7-DIMETHOXYISOQUINOLINE(Non-covalent)

EV1.1: 14 residues within 4Å: Chain A: P.37, H.42, W.63, Y.65, E.76, H.89, I.91, A.96, F.103, V.105, Y.139, F.142, F.143, N.146 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:W.63, A:Y.65, A:F.143 pi-Stacking: A:W.63, A:H.89 EV1.2: 14 residues within 4Å: Chain B: P.37, H.42, W.63, Y.65, E.76, H.89, I.91, A.96, F.103, V.105, Y.139, F.142, F.143, N.146 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:W.63, B:Y.65, B:F.143 Water bridges: B:T.78 pi-Stacking: B:W.63, B:H.89

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ozber, N. et al., Alkaloid binding to opium poppy major latex proteins triggers structural modification and functional aggregation. Nat Commun (2022)

Release Date

2023-03-01

Peptides

Pathogenesis Related 10-10 protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Pathogenesis Related 10-10 protein

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