SMTL ID : 7usk.1

BRD4-BD2 Ligand free

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.22 Å

Oligo State

monomer

Ligands

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 1 residues within 4Å: Chain A: F.17 1 PLIP interactions: 1 interactions with chain A Water bridges: A:K.14 EDO.2: 2 residues within 4Å: Chain A: W.26, Y.29 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:W.26 Water bridges: A:Y.29 EDO.5: 3 residues within 4Å: Chain A: A.72, L.76 Ligands: DMS.3 No protein-ligand interaction detected (PLIP) EDO.6: 5 residues within 4Å: Chain A: W.26, P.27, H.89, E.90, M.94 No protein-ligand interaction detected (PLIP)

2 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.3: 4 residues within 4Å: Chain A: L.76, S.79, N.80 Ligands: EDO.5 No protein-ligand interaction detected (PLIP) DMS.4: 4 residues within 4Å: Chain A: P.27, C.81, N.85, V.91 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.85

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sethi, B. et al., Targeting BRD4 and PI3K signaling pathways for the treatment of medulloblastoma. J Control Release (2023)

Release Date

2023-01-18

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 4

Related Entries With Identical Sequence