SMTL ID : 7usv.1 (1 other biounit)

Plasmodium falciparum protein Pfs230 D1 in complex with nanobody F10

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-1-1-mer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: E.77, K.78, L.79, K.82 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:L.79 Water bridges: A:K.82, A:K.82 Salt bridges: A:K.78, A:K.82 SO4.2: 5 residues within 4Å: Chain A: E.29, K.31 Chain B: Y.59, Y.60, K.65 9 PLIP interactions: 5 interactions with chain A, 4 interactions with chain B Water bridges: A:E.29, A:K.31, A:K.31, A:K.31, B:K.65, B:K.65 Salt bridges: A:K.31, B:K.65 Hydrogen bonds: B:Y.60 SO4.3: 5 residues within 4Å: Chain A: E.7, K.38, K.40, N.94, E.106 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.106 Salt bridges: A:K.38, A:K.40 SO4.4: 2 residues within 4Å: Chain A: N.33 Chain B: G.56 8 PLIP interactions: 3 interactions with chain A, 5 interactions with chain B Hydrogen bonds: A:N.33 Water bridges: A:E.145, A:E.145, B:G.56, B:T.58, B:T.58, B:T.58, B:T.58

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dietrich, M.H. et al., Nanobodies against Pfs230 block Plasmodium falciparum transmission. Biochem.J. (2022)

Release Date

2022-12-28

Peptides

Gametocyte surface protein P230: A
Nanobody F10: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Gametocyte surface protein P230

Nanobody F10

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