SMTL ID : 7usz.1

Human DDAH-1, holo (Zn-bound) form

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 2 residues within 4Å: Chain A: H.177, C.278 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:C.278, H2O.1, H2O.1, H2O.3 ZN.2: 3 residues within 4Å: Chain B: E.82, H.177, C.278 4 PLIP interactions: 1 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:C.278, H2O.11, H2O.11, H2O.11

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 1 residues within 4Å: Chain B: H.259 Ligand excluded by PLIP CL.4: 2 residues within 4Å: Chain B: R.46, Q.50 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Smith, C.A. et al., Esomeprazole covalently interacts with the cardiovascular enzyme dimethylarginine dimethylaminohydrolase: Insights into the cardiovascular risk of proton pump inhibitors. Biochim Biophys Acta Gen Subj (2022)

Release Date

2022-05-11

Peptides

N(G),N(G)-dimethylarginine dimethylaminohydrolase 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

N(G),N(G)-dimethylarginine dimethylaminohydrolase 1