- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.74 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x COA: COENZYME A(Non-covalent)
- 3 x PAR: PAROMOMYCIN(Non-covalent)
PAR.2: 11 residues within 4Å:- Chain A: E.114, N.115, H.137, D.146, D.147, Y.172
- Chain B: E.87, Y.104, N.128, G.129
- Ligands: COA.1
12 PLIP interactions:7 interactions with chain A, 5 interactions with chain B- Hydrogen bonds: A:E.114, A:N.115, A:N.115, A:N.115, A:H.137, A:D.146, A:D.147, B:E.87, B:Y.104, B:Y.104, B:G.129
- Water bridges: B:D.83
PAR.5: 11 residues within 4Å:- Chain B: E.114, N.115, H.137, D.146, D.147, Y.172
- Chain C: E.87, Y.104, N.128, G.129
- Ligands: COA.4
10 PLIP interactions:6 interactions with chain B, 4 interactions with chain C- Hydrogen bonds: B:E.114, B:N.115, B:N.115, B:N.115, B:H.137, B:D.147, C:E.87, C:Y.104, C:G.129
- Water bridges: C:D.83
PAR.8: 11 residues within 4Å:- Chain A: E.87, Y.104, N.128, G.129
- Chain C: E.114, N.115, H.137, D.146, D.147, Y.172
- Ligands: COA.7
11 PLIP interactions:6 interactions with chain C, 5 interactions with chain A- Hydrogen bonds: C:E.114, C:N.115, C:N.115, C:N.115, C:H.137, C:D.147, A:E.87, A:Y.104, A:Y.104, A:G.129
- Water bridges: A:D.83
- 3 x GOL: GLYCEROL(Non-functional Binders)
GOL.3: 5 residues within 4Å:- Chain A: D.58
- Chain C: R.29, F.81, D.82, E.84
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:D.58
GOL.6: 5 residues within 4Å:- Chain A: R.29, F.81, D.82, E.84
- Chain B: D.58
2 PLIP interactions:1 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:D.82, B:D.58
GOL.9: 5 residues within 4Å:- Chain B: R.29, F.81, D.82, E.84
- Chain C: D.58
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:D.58
- Water bridges: C:D.58
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bordeleau, E. et al., Mechanistic plasticity in ApmA enables aminoglycoside promiscuity for resistance. Nat.Chem.Biol. (2024)
- Release Date
- 2022-11-02
- Peptides
- Aminocyclitol acetyltransferase ApmA: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.74 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x COA: COENZYME A(Non-covalent)
- 3 x PAR: PAROMOMYCIN(Non-covalent)
- 3 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bordeleau, E. et al., Mechanistic plasticity in ApmA enables aminoglycoside promiscuity for resistance. Nat.Chem.Biol. (2024)
- Release Date
- 2022-11-02
- Peptides
- Aminocyclitol acetyltransferase ApmA: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A