SMTL ID : 7uvh.2 (1 other biounit)

Pfs230 domain 1 bound by RUPA-32 Fab

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.59 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NH4: AMMONIUM ION(Non-functional Binders)

NH4.1: 3 residues within 4Å: Chain A: S.52, S.54, S.56 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.52, A:S.54, A:S.54, A:S.56

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 2 residues within 4Å: Chain A: S.63, R.87 Ligand excluded by PLIP CL.3: 2 residues within 4Å: Chain A: A.28, Y.32 Ligand excluded by PLIP CL.4: 4 residues within 4Å: Chain A: A.28, F.29, S.30, K.77 Ligand excluded by PLIP

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.5: 5 residues within 4Å: Chain B: A.9, Y.87, Q.101, G.102, R.104 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:Y.87, B:Y.87, B:R.104

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.6: 5 residues within 4Å: Chain C: E.39, K.70, K.72, N.126, E.138 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:E.39, C:K.70, C:K.72, C:V.125, C:N.126

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ivanochko, D. et al., Potent transmission-blocking monoclonal antibodies from naturally exposed individuals target a conserved epitope on Plasmodium falciparum Pfs230. Immunity (2023)

Release Date

2023-02-15

Peptides

RUPA-32 Fab Heavy Chain: A
RUPA-32 Fab Light Chain: B
Gametocyte surface protein P230: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

C
F

RUPA-32 Fab Heavy Chain

RUPA-32 Fab Light Chain

Gametocyte surface protein P230

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