SMTL ID : 7uxk.1

Structure of CDK2 in complex with FP24322, a Helicon Polypeptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.63 Å

Oligo State

hetero-1-1-mer

Ligands

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 1 residues within 4Å: Chain A: T.138 No protein-ligand interaction detected (PLIP) EDO.2: 1 residues within 4Å: Chain A: Q.111 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.63, A:Q.111 EDO.3: 6 residues within 4Å: Chain A: E.52, R.123, V.124, L.125, R.127, G.148 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.52, A:L.125, A:R.127 EDO.4: 3 residues within 4Å: Chain A: S.107, V.290, K.292 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.292

1 x WHL: N,N'-(1,4-phenylene)diacetamide(Covalent)

WHL.5: 8 residues within 4Å: Chain A: A.94, S.95, T.98, G.99 Chain B: C.4, A.7, F.8, C.11 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:A.94, B:A.7, B:F.8 Hydrogen bonds: A:S.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, K. et al., De novo mapping of alpha-helix recognition sites on protein surfaces using unbiased libraries. Proc.Natl.Acad.Sci.USA (2022)

Release Date

2022-12-28

Peptides

Cyclin-dependent kinase 2: A
FP24322: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Cyclin-dependent kinase 2

FP24322

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