SMTL ID : 7uyl.1

850 Fab

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-1-mer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: Y.60, K.65, G.66, R.67, F.68, T.69 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.66, A:F.68 GOL.2: 7 residues within 4Å: Chain A: V.2, Q.3, L.4, W.113, G.114, Q.115 Chain B: A.43 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:V.2, A:L.4, A:L.4, A:Q.115 GOL.3: 8 residues within 4Å: Chain B: T.10, S.12, E.104, Y.139, P.140, R.141, E.142, Y.172 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:Y.139, B:R.141 Water bridges: B:T.10, B:T.10, B:E.142 GOL.4: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kucharska, I. et al., High-density binding to Plasmodium falciparum circumsporozoite protein repeats by inhibitory antibody elicited in mouse with human immunoglobulin repertoire. Plos Pathog. (2022)

Release Date

2022-11-23

Peptides

850 Fab Heavy Chain: A
850 Fab Light Chain: B
VHH nanobody: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

C
K

850 Fab Heavy Chain

850 Fab Light Chain

VHH nanobody

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