SMTL ID : 7v5s.1

Crystal structure of human bleomycin hydrolase C73A mutant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.02 Å

Oligo State

homo-hexamer

Ligands

6 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.1: 7 residues within 4Å: Chain A: Q.87, K.88, S.90, V.348, T.391, W.418, H.422 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.87 PG4.3: 7 residues within 4Å: Chain B: Q.87, K.88, S.90, V.348, T.391, W.418, H.422 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:Q.87 PG4.5: 7 residues within 4Å: Chain C: Q.87, K.88, S.90, V.348, T.391, W.418, H.422 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:Q.87 PG4.7: 7 residues within 4Å: Chain D: Q.87, K.88, S.90, V.348, T.391, W.418, H.422 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:Q.87 PG4.9: 7 residues within 4Å: Chain E: Q.87, K.88, S.90, V.348, T.391, W.418, H.422 1 PLIP interactions: 1 interactions with chain E Hydrogen bonds: E:Q.87 PG4.11: 7 residues within 4Å: Chain F: Q.87, K.88, S.90, V.348, T.391, W.418, H.422 1 PLIP interactions: 1 interactions with chain F Hydrogen bonds: F:Q.87

6 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.2: 7 residues within 4Å: Chain A: L.57, G.349, K.350, H.351, L.374, E.387 Chain D: D.199 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.351 PGE.4: 7 residues within 4Å: Chain B: L.57, G.349, K.350, H.351, L.374, E.387 Chain F: D.199 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:H.351 PGE.6: 7 residues within 4Å: Chain C: L.57, G.349, K.350, H.351, L.374, E.387 Chain E: D.199 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:H.351 PGE.8: 7 residues within 4Å: Chain A: D.199 Chain D: L.57, G.349, K.350, H.351, L.374, E.387 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:H.351 PGE.10: 7 residues within 4Å: Chain C: D.199 Chain E: L.57, G.349, K.350, H.351, L.374, E.387 1 PLIP interactions: 1 interactions with chain E Hydrogen bonds: E:H.351 PGE.12: 7 residues within 4Å: Chain B: D.199 Chain F: L.57, G.349, K.350, H.351, L.374, E.387 1 PLIP interactions: 1 interactions with chain F Hydrogen bonds: F:H.351

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zheng, Y.Z. et al., The Structure-Function Relationship of Human Bleomycin Hydrolase: Mutation of a Cysteine Protease into a Serine Protease. Chembiochem (2022)

Release Date

2022-06-29

Peptides

Bleomycin hydrolase: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

Bleomycin hydrolase