SMTL ID : 7v64.1

Crystal structure of Antibody 16A in complex with MUC1 Glycopeptide(GlycoT)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.56 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NGA: 2-acetamido-2-deoxy-beta-D-galactopyranose(Non-covalent)

NGA.1: 7 residues within 4Å: Chain A: R.52 Chain B: W.34, P.54 Chain C: T.7, A.8, P.9, P.10 5 PLIP interactions: 5 interactions with chain C Hydrophobic interactions: C:P.9 Hydrogen bonds: C:T.7, C:T.7 Water bridges: C:T.7, C:T.7

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Han, Y.B. et al., Site-specific GalNAc modification on a MUC1 neoantigen epitope forms a basis for high-affinity antibody binding. To Be Published

Release Date

2022-08-24

Peptides

16A fab Light chain: A
16A fab Heavy chain: B
Mucin-1 subunit alpha: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

16A fab Light chain

16A fab Heavy chain

Mucin-1 subunit alpha

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