SMTL ID : 7v6g.1

Structure of Candida albicans Fructose-1,6-bisphosphate aldolase mutation C157S with CN39

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.34 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.110, E.174, H.226, H.265 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.110, A:E.174, A:E.174, A:H.265, H2O.1 ZN.4: 4 residues within 4Å: Chain B: H.110, E.174, H.226, H.265 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:H.110, B:E.174, B:E.174, B:H.226, B:H.265

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: H.91, R.94 Chain B: H.91 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.91, A:R.94, A:R.94 EDO.5: 3 residues within 4Å: Chain B: H.91, R.94, A.95 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:H.91, B:R.94

2 x 6Y3: ~{N}-(4-aminophenyl)-2-selanyl-benzamide(Non-covalent)

6Y3.3: 13 residues within 4Å: Chain A: P.33, A.34, I.35, V.286, N.287, L.288, D.291, C.292, R.345, E.348, A.349, I.352, F.353 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:P.33, A:I.35, A:L.288, A:E.348, A:I.352, A:F.353 Hydrogen bonds: A:R.345, A:R.345, A:E.348 pi-Cation interactions: A:R.345 6Y3.6: 10 residues within 4Å: Chain B: A.34, V.286, L.288, D.291, C.292, R.345, E.348, A.349, I.352, F.353 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:E.348, B:A.349, B:I.352, B:I.352, B:F.353 Hydrogen bonds: B:D.291, B:R.345 pi-Cation interactions: B:R.345

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wen, W. et al., Structure-Guided Discovery of the Novel Covalent Allosteric Site and Covalent Inhibitors of Fructose-1,6-Bisphosphate Aldolase to Overcome the Azole Resistance of Candidiasis. J.Med.Chem. (2022)

Release Date

2022-02-23

Peptides

Fructose-bisphosphate aldolase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Fructose-bisphosphate aldolase