SMTL ID : 7va6.1

PaOrn Oligoribonuclease D11A mutant with RNA GU complex structure

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

1 x G- U: RNA (5'-R(P*GP*U)-3')(Non-covalent)

G-U.1: 14 residues within 4Å: Chain A: L.12, E.13, M.14, G.16, L.17, W.60, N.61, H.65, N.106, S.107, Q.110, S.134 Chain B: Y.128, R.129 Protein-ligand interaction information (PLIP) not available

1 x IMD: IMIDAZOLE(Non-covalent)

IMD.2: 4 residues within 4Å: Chain A: R.112, R.113, Y.116 Chain B: R.113 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:R.113 Water bridges: B:Q.110 pi-Stacking: A:Y.116

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, J. et al., PaOrn Oligoribonuclease D11A mutant with RNA GU complex structure. To Be Published

Release Date

2022-09-07

Peptides

Oligoribonuclease: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Oligoribonuclease

Related Entries With Identical Sequence