SMTL ID : 7vbo.1

Alginate binding domain CBM

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 4 residues within 4Å: Chain A: D.98, D.156, D.159, I.161 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.98, A:D.156, A:D.159, A:I.161, H2O.3

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: K.26, K.43, D.50, R.52 4 PLIP interactions: 4 interactions with chain A Water bridges: A:D.50 Salt bridges: A:K.26, A:K.43, A:R.52

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ji, S. et al., Identification and structural analysis of a carbohydrate-binding module specific to alginate, a representative of a new family, CBM96. J.Biol.Chem. (2023)

Release Date

2022-09-07

Peptides

Alginate lyase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Alginate lyase