SMTL ID : 7vbw.1

Structure of the GTP-bound AAA+ ATPase domain of the transcriptional regulator GtrR in Burkholderia cenocepacia

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)

GTP.1: 16 residues within 4Å: Chain A: H.141, T.168, G.169, V.170, G.171, K.172, E.173, R.174, D.238, R.313, L.321, F.325, V.358, R.359, R.362 Ligands: MG.2 23 PLIP interactions: 23 interactions with chain A Hydrogen bonds: A:E.167, A:G.169, A:V.170, A:G.171, A:G.171, A:K.172, A:E.173, A:R.174, A:R.313, A:R.313, A:R.362 Water bridges: A:K.172, A:K.172, A:K.172, A:Q.177, A:N.195, A:D.238 Salt bridges: A:K.172, A:K.172, A:R.359, A:R.359, A:R.359 pi-Cation interactions: A:R.174

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 5 residues within 4Å: Chain A: E.173, F.236, D.238, R.359 Ligands: GTP.1 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.238, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yan, X.F. et al., Structural analyses of the AAA+ ATPase domain of the transcriptional regulator GtrR in the BDSF quorum-sensing system in Burkholderia cenocepacia. Febs Lett. (2022)

Release Date

2021-12-15

Peptides

Sigma-54 dependent trancsriptional regulator: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Sigma-54 dependent trancsriptional regulator

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