SMTL ID : 7vdu.1

The structure of cyclin-dependent kinase 2 (CDK2) in complex with Compound 1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.53 Å

Oligo State

monomer

Ligands

1 x 65L: [1-[3-fluoranyl-4-[(2-piperidin-4-yloxy-1,6-naphthyridin-7-yl)amino]phenyl]pyrazol-3-yl]methanol(Non-covalent)

65L.1: 17 residues within 4Å: Chain A: I.12, G.15, V.20, A.33, K.35, F.82, E.83, F.84, L.85, H.86, Q.87, D.88, K.91, Q.133, N.134, L.136, D.147 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:I.12, A:A.33, A:F.82, A:F.82, A:L.136 Hydrogen bonds: A:L.85, A:L.85, A:D.147 Water bridges: A:T.16, A:N.134

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Daniels, M.H. et al., Discovery and Optimization of Highly Selective Inhibitors of CDK5. J.Med.Chem. (2022)

Release Date

2022-03-09

Peptides

Cyclin-dependent kinase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cyclin-dependent kinase 2

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