SMTL ID : 7vef.1

The structure of GfsA KSQ-AT didomain in complex with a malonate substrate analog

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.65 Å

Oligo State

homo-dimer

Ligands

2 x 6IU: N-(2-acetamidoethyl)-2-nitro-ethanamide(Non-covalent)

6IU.1: 9 residues within 4Å: Chain A: Q.191, T.295, T.296, H.326, T.328, T.330, H.364, F.432, M.434 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.191, A:T.295, A:T.295 6IU.3: 9 residues within 4Å: Chain B: Q.191, T.295, T.296, H.326, T.328, T.330, H.364, F.432, M.434 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:Q.191, B:T.295, B:T.295, B:T.328, B:T.330

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 6 residues within 4Å: Chain A: P.782, T.785, V.786, V.794, V.795, S.796 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.785, A:V.786, A:V.795, A:S.796 GOL.4: 6 residues within 4Å: Chain B: P.782, T.785, V.786, V.794, V.795, S.796 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:T.785, B:V.786, B:V.795, B:S.796

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chisuga, T. et al., Structural Insight into the Reaction Mechanism of Ketosynthase-Like Decarboxylase in a Loading Module of Modular Polyketide Synthases. Acs Chem.Biol. (2022)

Release Date

2022-01-12

Peptides

Polyketide synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Polyketide synthase

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