SMTL ID : 7vkh.1 (1 other biounit)

Crystal structure of AF9 YEATS domain in complex with hit 2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

monomer

Ligands

1 x 7IY: ~{N}-(3-azanyl-4-chloranyl-phenyl)-2-methoxy-ethanamide(Non-covalent)

7IY.1: 9 residues within 4Å: Chain A: F.28, H.56, S.58, F.59, G.77, Y.78, A.79, G.80, F.81 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:A.79, A:F.81 Hydrogen bonds: A:S.58, A:S.58, A:Y.78, A:Y.78, A:Y.78, A:A.79 pi-Stacking: A:H.56

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 2 residues within 4Å: Chain A: H.41, A.138 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:A.138

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, Y. et al., Fragment-Based Discovery of AF9 YEATS Domain Inhibitors. Int J Mol Sci (2022)

Release Date

2022-10-05

Peptides

Protein AF-9: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein AF-9

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