SMTL ID : 7vn9.1 (1 other biounit)

Crystal structure of human coronavirus 229E spike protein receptor-binding domain in complex with C04 Fab

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 4.49 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.1: 1 residues within 4Å: Chain C: N.33 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.2: 3 residues within 4Å: Chain A: K.65 Chain C: N.40, T.42 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xiang, J. et al., Antigenic mapping reveals sites of vulnerability on alpha-HCoV spike protein. Commun Biol (2022)

Release Date

2022-10-26

Peptides

C04 Fab heavy chain: A
C04 Fab light chain: B
Spike glycoprotein S1: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

C
E

C04 Fab heavy chain

C04 Fab light chain

Spike glycoprotein S1

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