SMTL ID : 7voo.1

Induced alpha-2-macroglobulin monomer

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

3 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 4 residues within 4Å: Chain A: P.3, N.29, T.85, Q.86 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 3 residues within 4Å: Chain A: N.384, T.385, T.386 No protein-ligand interaction detected (PLIP) NAG-NAG.3: 2 residues within 4Å: Chain A: N.841, N.843 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG- MAN: alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-MAN.4: 3 residues within 4Å: Chain A: N.965, E.966, Y.1029 No protein-ligand interaction detected (PLIP)

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.5: 1 residues within 4Å: Chain A: N.44 No protein-ligand interaction detected (PLIP) NAG.6: 3 residues within 4Å: Chain A: E.219, N.221, Q.277 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.221, A:Q.277 NAG.7: 1 residues within 4Å: Chain A: N.370 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huang, X. et al., Cryo-EM structures reveal the dynamic transformation of human alpha-2-macroglobulin working as a protease inhibitor. Sci China Life Sci (2022)

Release Date

2022-10-19

Peptides

Alpha-2-macroglobulin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Alpha-2-macroglobulin