SMTL ID : 7vqo.1

Cryo-EM structure of Ams1 bound to the FW domain of Nbr1

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-tetramer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.292, D.294, D.404, H.614, D.615 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:H.292, A:D.294, A:D.294, A:D.404, A:H.614 ZN.2: 5 residues within 4Å: Chain B: H.292, D.294, D.404, H.614, D.615 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:H.292, B:D.294, B:D.294, B:D.404, B:H.614 ZN.3: 5 residues within 4Å: Chain C: H.292, D.294, D.404, H.614, D.615 5 PLIP interactions: 5 interactions with chain C Metal complexes: C:H.292, C:D.294, C:D.294, C:D.404, C:H.614 ZN.4: 5 residues within 4Å: Chain D: H.292, D.294, D.404, H.614, D.615 5 PLIP interactions: 5 interactions with chain D Metal complexes: D:H.292, D:D.294, D:D.294, D:D.404, D:H.614

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, J. et al., Structural mechanism of protein recognition by the FW domain of autophagy receptor Nbr1. Nat Commun (2022)

Release Date

2022-07-06

Peptides

Ams1, Nbr1 and malE fusion protein: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Ams1, Nbr1 and malE fusion protein