SMTL ID : 7vuu.3 (2 other biounits)

Crystal structure of AlleyCat10 with inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

homo-dimer

Ligands

2 x 3NY: 5-nitro-1H-benzotriazole(Non-covalent)

3NY.1: 11 residues within 4Å: Chain A: E.17, L.30, M.34, R.37, L.49, H.50, T.53, V.61, F.66, R.69, M.70 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.30, A:L.49, A:L.49, A:R.69 Hydrogen bonds: A:R.37, A:R.37 3NY.8: 10 residues within 4Å: Chain B: E.17, L.30, M.34, R.37, L.49, H.50, T.53, V.61, R.69, M.70 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:L.30, B:L.49, B:R.69 Hydrogen bonds: B:R.37, B:R.37

8 x CA: CALCIUM ION(Non-covalent)

CA.2: 5 residues within 4Å: Chain A: D.18, D.20, N.22, Y.24, E.29 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.18, A:Y.24, A:E.29, A:E.29, H2O.1 CA.3: 5 residues within 4Å: Chain A: D.54, D.56, D.58, Q.60, E.65 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.54, A:Q.60, A:E.65, A:E.65, H2O.1 CA.4: 3 residues within 4Å: Chain A: E.12 Chain B: R.51, D.54 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:R.51, B:D.54, H2O.1, H2O.2, H2O.2 CA.5: 4 residues within 4Å: Chain A: E.8, E.12, R.15 Chain B: E.52 5 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B, 2 Ligand-Water interactions Metal complexes: A:E.8, A:E.12, B:E.52, H2O.1, H2O.2 CA.6: 2 residues within 4Å: Chain A: R.51, D.54 6 PLIP interactions: 2 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:R.51, A:D.54, H2O.1, H2O.1, H2O.2, H2O.2 CA.7: 2 residues within 4Å: Chain A: R.15, D.18 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:R.15, A:D.18, H2O.1, H2O.1, H2O.1 CA.9: 5 residues within 4Å: Chain B: D.18, D.20, N.22, Y.24, E.29 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.18, B:Y.24, B:E.29, B:E.29, H2O.2 CA.10: 5 residues within 4Å: Chain B: D.54, D.56, D.58, Q.60, E.65 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:D.54, B:D.56, B:D.58, B:Q.60, B:E.65

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bhattacharya, S. et al., NMR-guided directed evolution. Nature (2022)

Release Date

2022-07-27

Peptides

AlleyCat: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
C

AlleyCat

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