SMTL ID : 7vv6.1

Cryo-EM structure of pseudoallergen receptor MRGPRX2 complex with C48/80 (local)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x CLR: CHOLESTEROL(Non-covalent)

CLR.1: 8 residues within 4Å: Chain A: V.66, L.69, A.147, C.150, V.151, W.154, A.155, L.158 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.69, A:A.147, A:V.151, A:W.154, A:W.154, A:W.154, A:L.158

1 x 6IB: 2-[4-methoxy-3-[[2-methoxy-3-[[2-methoxy-5-[2-(methylamino)ethyl]phenyl]methyl]-5-[2-(methylamino)ethyl]phenyl]methyl]phenyl]-~{N}-methyl-ethanamine(Non-covalent)

6IB.2: 10 residues within 4Å: Chain A: Q.20, L.22, E.164, C.168, S.177, D.184, W.243, L.247, W.248, S.253 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.22, A:W.243, A:W.243 Hydrogen bonds: A:L.247 pi-Stacking: A:F.170, A:W.248

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, F. et al., Structure, function and pharmacology of human itch receptor complexes. Nature (2021)

Release Date

2021-12-01

Peptides

Mas-related G-protein coupled receptor member X2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
R

Membrane

We predict this structure to be a membrane protein.
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Mas-related G-protein coupled receptor member X2

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