SMTL ID : 7vvi.1

OXA-58 crystal structure of acylated meropenem complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 1 residues within 4Å: Chain A: K.236 3 PLIP interactions: 3 interactions with chain A Water bridges: A:V.181, A:K.236 Salt bridges: A:K.236

1 x MER: (4R,5S)-3-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-5-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-4-methyl-4,5-d ihydro-1H-pyrrole-2-carboxylic acid(Covalent)

MER.2: 16 residues within 4Å: Chain A: A.54, S.55, K.58, F.86, A.88, W.89, A.101, S.102, V.104, L.142, S.193, G.194, W.195, M.197, I.232, R.235 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:F.86, A:V.104, A:L.142, A:I.232 Hydrogen bonds: A:S.55, A:S.102, A:S.193, A:S.193, A:W.195 Water bridges: A:A.101, A:K.192 Salt bridges: A:R.235

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Saino, H. et al., OXA-58 crystal structure of acylated meropenem complex. to be published

Release Date

2022-11-23

Peptides

Beta-lactamase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-lactamase

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