SMTL ID : 7vww.1 (3 other biounits)

X-ray structure of a domain-swapped poly-glutamine Monellin mutant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-dimer

Ligands

7 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.1: 6 residues within 4Å: Chain A: R.76, G.77, R.78 Chain B: N.14, L.15, F.18 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:N.14, A:R.78 PEG.2: 5 residues within 4Å: Chain A: K.63, F.65, P.86 Chain B: Y.29 Ligands: PEG.5 1 PLIP interactions: 1 interactions with chain A Water bridges: A:K.63 PEG.3: 4 residues within 4Å: Chain A: N.35, K.36 Chain B: Y.59, D.62 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.35 Water bridges: A:K.36 PEG.4: 4 residues within 4Å: Chain A: Y.59, D.62 Chain B: N.35, K.36 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.62 PEG.5: 3 residues within 4Å: Chain A: D.62, K.63 Ligands: PEG.2 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.62 PEG.6: 7 residues within 4Å: Chain B: I.6, D.7, G.9, P.10, F.11, T.12, K.43 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:G.9, B:F.11 PEG.7: 5 residues within 4Å: Chain A: Y.29, L.32 Chain B: K.63, F.65, P.86 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Manjula, R. et al., Effect of polyQ on protein assembly. To Be Published

Release Date

2022-11-16

Peptides

Monellin chain B,Monellin chain A: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Monellin chain B,Monellin chain A

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