SMTL ID : 7vy4.1

Snapshots of Human PSMD10(Gankyrin) unfolding by urea: 2 hours incubation

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.22 Å

Oligo State

monomer

Ligands

5 x URE: UREA(Non-functional Binders)

URE.1: 3 residues within 4Å: Chain A: Y.160, Y.161, K.162 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.162 Water bridges: A:Y.161, A:K.162 URE.2: 3 residues within 4Å: Chain A: Y.15, W.46, S.49 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.15, A:S.49, A:S.49 Water bridges: A:R.41 URE.3: 2 residues within 4Å: Chain A: G.63, P.65 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.63 URE.4: 3 residues within 4Å: Chain A: G.3, C.4, N.12 No protein-ligand interaction detected (PLIP) URE.5: 5 residues within 4Å: Chain A: L.159, K.162, A.163, T.165, Q.194 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.194

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Medur Gurushankar, M.S. et al., Snapshots of urea-induced early structural changes and unfolding of an ankyrin repeat protein at atomic resolution. Protein Sci. (2022)

Release Date

2022-11-16

Peptides

26S proteasome non-ATPase regulatory subunit 10: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

26S proteasome non-ATPase regulatory subunit 10

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