SMTL ID : 7vze.1 (3 other biounits)

Crystal structure of PTPN4 PDZ bound to the PBM of HPV16 E6

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.88 Å

Oligo State

monomer

Ligands

1 x THR- ARG- ARG- GLU- THR- GLN- LEU: the PDZ-binding motif of HPV16 E6(Non-covalent)

THR-ARG-ARG-GLU-THR-GLN-LEU.1: 13 residues within 4Å: Chain A: R.18, F.19, G.20, F.21, N.22, V.23, K.24, Q.29, M.31, S.36, H.70, D.71, I.77 22 PLIP interactions: 22 interactions with chain A Hydrophobic interactions: A:F.21, A:V.23, A:K.24, A:I.77, A:I.77 Hydrogen bonds: A:R.18, A:F.19, A:G.20, A:F.21, A:F.21, A:N.22, A:V.23, A:V.23, A:K.24, A:Q.29, A:S.36, A:H.70, A:D.71 Salt bridges: A:R.18, A:K.24, A:D.71 pi-Cation interactions: A:H.70

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, H.S. et al., Structural and biochemical analysis of the PTPN4 PDZ domain bound to the C-terminal tail of the human papillomavirus E6 oncoprotein. J.Microbiol (2022)

Release Date

2022-03-02

Peptides

Tyrosine-protein phosphatase non-receptor type 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosine-protein phosphatase non-receptor type 4

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