SMTL ID : 7w30.4 (3 other biounits)

Tudor domain of SMN in complex with a small molecule

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x 8AT: 1,2-dimethylquinolin-4-imine(Non-covalent)

8AT.1: 4 residues within 4Å: Chain A: W.21, Y.28, Y.49, N.51 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:W.21, A:Y.28, A:Y.49 pi-Stacking: A:Y.49

4 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.2: 2 residues within 4Å: Chain A: E.53, E.54 No protein-ligand interaction detected (PLIP) UNX.3: 2 residues within 4Å: Chain A: D.15, K.16 No protein-ligand interaction detected (PLIP) UNX.4: 3 residues within 4Å: Chain A: P.29, T.47, Y.49 No protein-ligand interaction detected (PLIP) UNX.5: 1 residues within 4Å: Chain A: D.59 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, Y. et al., A small molecule antagonist of SMN disrupts the interaction between SMN and RNAP II. Nat Commun (2022)

Release Date

2022-10-05

Peptides

Survival motor neuron protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

Survival motor neuron protein

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