SMTL ID : 7w6f.1

Polyketide cyclase OAC-F24I mutant from Cannabis sativa in complex with 6-nonylresorcylic acid

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.58 Å

Oligo State

homo-dimer

Ligands

2 x 8I6: 2-nonyl-4,6-bis(oxidanyl)benzoic acid(Non-covalent)

8I6.1: 20 residues within 4Å: Chain A: H.8, I.10, L.12, F.14, F.26, I.27, Y.30, W.45, H.60, I.61, V.62, Y.75, I.76, H.81, F.84, R.89, W.92, L.95, I.97 Chain B: K.52 16 PLIP interactions: 15 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:I.10, A:L.12, A:F.26, A:I.27, A:Y.30, A:Y.30, A:W.45, A:F.84, A:W.92, A:L.95, A:I.97 Hydrogen bonds: A:Y.75, A:R.89 Salt bridges: A:H.8, A:H.81 Water bridges: B:K.52 8I6.3: 19 residues within 4Å: Chain B: H.8, I.10, L.12, F.14, F.26, I.27, Y.30, W.45, H.60, I.61, V.62, Y.75, I.76, H.81, F.84, G.85, W.92, L.95, I.97 14 PLIP interactions: 14 interactions with chain B Hydrophobic interactions: B:I.10, B:F.26, B:F.26, B:I.27, B:Y.30, B:W.45, B:V.62, B:F.84, B:W.92, B:W.92, B:L.95 Hydrogen bonds: B:Y.75 Salt bridges: B:H.8, B:H.81

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 7 residues within 4Å: Chain A: E.24, I.27, K.28, V.31, W.45 Chain B: R.103, K.104 5 PLIP interactions: 2 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:K.28, A:W.45, B:R.103, B:R.103, B:K.104

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, Y.E. et al., Dual Engineering of Olivetolic Acid Cyclase and Tetraketide Synthase to Generate Longer Alkyl-Chain Olivetolic Acid Analogs. Org.Lett. (2022)

Release Date

2022-02-02

Peptides

Olivetolic acid cyclase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Olivetolic acid cyclase

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