SMTL ID : 7w6x.1

Crystal structure of E. coli RseP in complex with batimastat

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.22, H.26, D.402 Ligands: BAT.2 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.22, A:H.26, A:D.402, A:D.402 ZN.3: 2 residues within 4Å: Chain A: H.86, H.87 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.86, A:H.87

1 x BAT: 4-(N-HYDROXYAMINO)-2R-ISOBUTYL-2S-(2-THIENYLTHIOMETHYL)SUCCINYL-L-PHENYLALANINE-N-METHYLAMIDE(Non-covalent)

BAT.2: 18 residues within 4Å: Chain A: I.19, H.22, E.23, H.26, F.44, L.66, G.67, G.68, Y.69, L.390, I.393, N.394, V.400, L.401, D.402, L.435, M.439 Ligands: ZN.1 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:H.22, A:F.44, A:I.393, A:L.401, A:L.435 Hydrogen bonds: A:L.66, A:G.68, A:G.68, A:N.394, A:N.394

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Imaizumi, Y. et al., Mechanistic insights into intramembrane proteolysis by E. coli site-2 protease homolog RseP. Sci Adv (2022)

Release Date

2022-09-07

Peptides

Regulator of sigma-E protease RseP: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Regulator of sigma-E protease RseP