SMTL ID : 7w72.1

Structure of a human glycosylphosphatidylinositol (GPI) transamidase

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-mer
Ligands
1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1 x 8JY: [2-[[(2~{R})-2-hexanoyloxy-3-[(~{E})-hex-3-enoxy]propoxy]-oxidanyl-phosphoryl]oxy-3,4,5,6-tetrakis(oxidanyl)phenyl] (2~{E},4~{E})-hepta-2,4-dienoate(Covalent)
2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x CA: CALCIUM ION(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Zhang, H. et al., Structure of human glycosylphosphatidylinositol transamidase. Nat.Struct.Mol.Biol. (2022)
Release Date
2022-02-16
Peptides
Phosphatidylinositol glycan anchor biosynthesis class U protein: A
GPI transamidase component PIG-S: B
GPI transamidase component PIG-T: C
GPI-anchor transamidase: D
Glycosylphosphatidylinositol anchor attachment 1 protein: E
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
U
B
S
C
T
D
K
E
A
Membrane
We predict this structure to be a membrane protein.

Phosphatidylinositol glycan anchor biosynthesis class U protein

GPI transamidase component PIG-S

GPI transamidase component PIG-T

GPI-anchor transamidase

Glycosylphosphatidylinositol anchor attachment 1 protein