SMTL ID : 7w77.1

cryo-EM structure of human NaV1.3/beta1/beta2-bulleyaconitineA

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-mer
Ligands
1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
5 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
3 x 9Z9: (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en(Non-covalent)
16 x 6OU: [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate(Non-covalent)(Covalent)(Non-functional Binders)
1 x 966: [(1S,2R,3R,4R,5R,6S,8R,9S,13S,16S,17R,18R)-11-ethyl-5-hydroxy-6,16,18-trimethoxy-4-(4-methoxybenzoyl)-13-(methoxymethyl)-11-azahexacyclo[7.7.2.12,5.01,10.03,8.013,17]nonadecan-8-yl] acetate(Covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Li, X. et al., Structural basis for modulation of human Na V 1.3 by clinical drug and selective antagonist. Nat Commun (2022)
Release Date
2022-04-06
Peptides
Sodium channel subunit beta-1: A
Sodium channel subunit beta-2: B
Sodium channel protein type 3 subunit alpha: C
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
B
B
C
C
D
Membrane
We predict this structure to be a membrane protein.

Sodium channel subunit beta-1

Sodium channel subunit beta-2

Sodium channel protein type 3 subunit alpha

Related Entries With Identical Sequence

6agf.1 | 6j8g.1 | 6j8h.1 | 6j8i.1 | 6j8j.1 | 7w7f.1 | 7w9k.1 | 7w9l.1 | 7w9m.1 | 7w9p.1 | 7w9t.1 | 7xm9.1 | 7xmf.1 | 7xmg.1 | 7xve.1 | 7xvf.1 | 8fhd.1 | 8g1a.1 | 8gz1.1 | 8gz2.1 | 8i5b.1 | 8i5g.1 | 8i5x.1 | 8i5y.1 | 8j4f.1 | 8s9b.1 | 8s9c.1 | 8thg.1 | 8thh.1