SMTL ID : 7w7x.1

The crystal structure of human abl1 kinase domain in complex with ABL1-A11

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x 8DW: 5-[5-(dimethylcarbamoyl)pyridin-3-yl]-3-(5-fluorosulfonyloxy-2-methoxy-phenyl)-1H-pyrrolo[2,3-b]pyridine(Non-covalent)

8DW.1: 19 residues within 4Å: Chain A: L.20, G.21, Y.25, V.28, A.41, K.43, M.62, V.71, I.85, T.87, E.88, F.89, M.90, T.91, G.93, N.94, L.142, A.152, F.154 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.20, A:L.20, A:V.28, A:V.28, A:A.41, A:L.142, A:L.142 Hydrogen bonds: A:G.21, A:T.87, A:E.88, A:M.90, A:N.94 8DW.2: 19 residues within 4Å: Chain B: L.20, G.21, Y.25, V.28, A.41, K.43, M.62, V.71, I.85, T.87, E.88, F.89, M.90, T.91, G.93, N.94, L.142, A.152, F.154 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:L.20, B:V.28, B:A.41, B:L.142, B:L.142 Hydrogen bonds: B:G.21, B:Y.25, B:T.87, B:E.88, B:M.90, B:N.94, B:N.94 Water bridges: B:D.97

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, P. et al., Cell-Active, Reversible, and Irreversible Covalent Inhibitors That Selectively Target the Catalytic Lysine of BCR-ABL Kinase. Angew.Chem.Int.Ed.Engl. (2022)

Release Date

2022-04-27

Peptides

Tyrosine-protein kinase ABL1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Tyrosine-protein kinase ABL1