SMTL ID : 7w9m.1

Cryo-EM structure of human Nav1.7(E406K) in complex with auxiliary beta subunits, ProTx-II and tetrodotoxin (S6IV pi helix conformer)

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-mer
Ligands
2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x 9SR: (1R,5R,6R,7R,9S,11S,12S,13S,14S)-3-amino-14-(hydroxymethyl)-8,10-dioxa-2,4-diazatetracyclo[7.3.1.1~7,11~.0~1,6~]tetradec-3-ene-5,9,12,13,14-pentol (non-preferred name)(Non-covalent)
6 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x P5S: O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine(Non-covalent)
5 x Y01: CHOLESTEROL HEMISUCCINATE(Non-covalent)
1 x LPE: 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Huang, G. et al., High-resolution structures of human Na v 1.7 reveal gating modulation through alpha-pi helical transition of S6 IV. Cell Rep (2022)
Release Date
2022-05-25
Peptides
Sodium channel protein type 9 subunit alpha: A
Sodium channel subunit beta-1: B
Sodium channel subunit beta-2: C
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
Membrane
We predict this structure to be a membrane protein.

Sodium channel protein type 9 subunit alpha

Sodium channel subunit beta-1

Sodium channel subunit beta-2

Related Entries With Identical Sequence

6agf.1 | 6j8g.1 | 6j8h.1 | 6j8i.1 | 6j8j.1 | 7w77.1 | 7w7f.1 | 7w9k.1 | 7w9l.1 | 7w9p.1 | 7w9t.1 | 7xm9.1 | 7xmf.1 | 7xmg.1 | 7xve.1 | 7xvf.1 | 8fhd.1 | 8g1a.1 | 8gz1.1 | 8gz2.1 | 8i5b.1 | 8i5g.1 | 8i5x.1 | 8i5y.1 | 8j4f.1 | 8s9b.1 | 8s9c.1 | 8thg.1 | 8thh.1