SMTL ID : 7waa.1

Crystal structure of MCR-1-S treated by AgNO3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.58 Å

Oligo State

homo-dimer

Ligands

19 x AG: SILVER ION(Non-covalent)(Covalent)

AG.1: 5 residues within 4Å: Chain A: E.41, T.80, D.260, H.261 Ligands: AG.3 Ligand excluded by PLIP AG.2: 2 residues within 4Å: Chain A: R.44, H.47 Ligand excluded by PLIP AG.3: 8 residues within 4Å: Chain A: G.40, E.41, T.80, V.84, N.124, H.185, D.260 Ligands: AG.1 Ligand excluded by PLIP AG.4: 2 residues within 4Å: Chain A: M.187, H.190 Ligand excluded by PLIP AG.5: 2 residues within 4Å: Chain A: Y.16, H.17 Ligand excluded by PLIP AG.6: 2 residues within 4Å: Chain A: H.219, Q.220 Ligand excluded by PLIP AG.7: 3 residues within 4Å: Chain A: M.302, I.335, R.336 Ligand excluded by PLIP AG.8: 2 residues within 4Å: Chain A: H.247, Y.251 Ligand excluded by PLIP AG.9: 6 residues within 4Å: Chain A: W.120, D.122, S.125, D.126, S.127, H.185 Ligand excluded by PLIP AG.10: 5 residues within 4Å: Chain B: E.41, T.80, D.260, H.261 Ligands: AG.12 Ligand excluded by PLIP AG.11: 2 residues within 4Å: Chain B: R.44, H.47 Ligand excluded by PLIP AG.12: 8 residues within 4Å: Chain B: G.40, E.41, T.80, V.84, N.124, H.185, D.260 Ligands: AG.10 Ligand excluded by PLIP AG.13: 2 residues within 4Å: Chain B: M.187, H.190 Ligand excluded by PLIP AG.14: 2 residues within 4Å: Chain B: H.17, K.327 Ligand excluded by PLIP AG.15: 2 residues within 4Å: Chain B: H.219, Q.220 Ligand excluded by PLIP AG.16: 3 residues within 4Å: Chain B: M.302, I.335, R.336 Ligand excluded by PLIP AG.17: 2 residues within 4Å: Chain B: H.247, Y.251 Ligand excluded by PLIP AG.18: 6 residues within 4Å: Chain B: W.120, D.122, S.125, D.126, S.127, H.185 Ligand excluded by PLIP AG.19: 1 residues within 4Å: Chain B: M.29 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Q. et al., Re-sensitization of mcr carrying multidrug resistant bacteria to colistin by silver. Proc.Natl.Acad.Sci.USA (2022)

Release Date

2022-03-16

Peptides

Probable phosphatidylethanolamine transferase Mcr-1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Probable phosphatidylethanolamine transferase Mcr-1

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