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SMTL ID : 7web.1

SARS-CoV-2 Omicron variant spike protein with two XGv347 binding to two open state RBDs

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-2-2-3-mer
Ligands
15 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-covalent)
5 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
29 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Wang, K. et al., Memory B cell repertoire from triple vaccinees against diverse SARS-CoV-2 variants. Nature (2022)
Release Date
2022-05-04
Peptides
The heavy chain of Fab XGv347: AB
The light chain of Fab XGv347: CD
Spike glycoprotein: EFG
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
G
B
H
C
I
D
L
E
B
F
C
G
D

The heavy chain of Fab XGv347

Toggle Identical (AB)

The light chain of Fab XGv347

Toggle Identical (CD)

Spike glycoprotein

Toggle Identical (EFG)

Related Entries With Identical Sequence

7we7.1 | 7we8.1 | 7we9.1 | 7wea.1 | 7wec.1 | 7wed.1 | 7wee.1