SMTL ID : 7wex.1

The crystal structure of substrate-free CYP107X1 from Streptomyces avermitilis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.99 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 27 residues within 4Å: Chain A: L.98, L.99, H.106, R.110, L.244, I.245, A.248, G.249, N.252, T.253, P.294, A.298, I.299, R.301, L.324, A.351, L.352, G.353, V.356, H.357, C.359, L.360, G.361, L.364, A.365, E.368 Ligands: GOL.2 16 PLIP interactions: 15 interactions with chain A, 1 Ligand-Water interactions Hydrophobic interactions: A:L.99, A:L.99, A:L.244, A:N.252, A:P.294, A:L.324, A:L.352, A:L.360, A:L.364 Hydrogen bonds: A:I.299 Salt bridges: A:H.106, A:R.110, A:R.301, A:H.357 Metal complexes: A:C.359, H2O.2

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 7 residues within 4Å: Chain A: A.248, N.252, A.295, L.297, A.298, I.299 Ligands: HEM.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.252, A:L.297 Water bridges: A:L.297

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lin, S. et al., The 16 alpha-Hydroxylation of Progesterone by Cytochrome P450 107X1 from Streptomyces avermitilis. Chem.Biodivers. (2022)

Release Date

2022-06-29

Peptides

Cytochrome P450 hydroxylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cytochrome P450 hydroxylase