SMTL ID : 7wqi.1

Crystal structure of SARS coronavirus main protease in complex with PF07304814

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.93 Å

Oligo State

homo-dimer

Ligands

2 x 80I: [(3~{S})-3-[[(2~{S})-2-[(4-methoxy-1~{H}-indol-2-yl)carbonylamino]-4-methyl-pentanoyl]amino]-2-oxidanylidene-4-[(3~{R})-2-oxidanylidene-3,4-dihydropyrrol-3-yl]butyl] dihydrogen phosphate(Covalent)(Non-covalent)

80I.1: 14 residues within 4Å: Chain A: T.25, H.40, F.139, L.140, N.141, G.142, S.143, C.144, H.162, H.163, M.164, E.165, H.171, Q.188 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:E.165 Hydrogen bonds: A:T.25, A:F.139, A:G.142, A:S.143, A:C.144, A:H.163, A:E.165, A:E.165, A:E.165 80I.2: 16 residues within 4Å: Chain B: T.25, H.40, F.139, L.140, N.141, G.142, S.143, C.144, H.162, H.163, M.164, E.165, P.167, H.171, R.187, Q.188 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:M.164 Hydrogen bonds: B:F.139, B:G.142, B:S.143, B:C.144, B:H.163, B:E.165, B:E.165

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lin, C. et al., Crystal structure of SARS coronavirus main protease in complex with PF07304814. To Be Published

Release Date

2023-01-25

Peptides

3C-like proteinase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

3C-like proteinase

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