SMTL ID : 7wrz.1

Local resolution of BD55-5840 Fab and SARS-COV2 Omicron RBD

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 5 residues within 4Å: Chain A: Q.61 Chain C: D.5, N.9, V.33, L.37 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.61

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cao, Y. et al., BA.2.12.1, BA.4 and BA.5 escape antibodies elicited by Omicron infection. Nature (2022)

Release Date

2022-06-22

Peptides

BD55-5840H: A
BD55-5840L: B
Spike protein S1: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

C
R

BD55-5840H

BD55-5840L

Spike protein S1

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