SMTL ID : 7wsh.1

Cryo-EM structure of SARS-CoV-2 spike receptor-binding domain in complex with sea lion ACE2

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 3 residues within 4Å: Chain A: H.374, H.378, E.402 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.374, A:H.378, A:E.402, A:E.402

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 4 residues within 4Å: Chain B: F.6, G.7, F.10, N.11 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:F.6, B:F.10

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, S. et al., Cross-species recognition and molecular basis of SARS-CoV-2 and SARS-CoV binding to ACE2s of marine animals. Natl Sci Rev (2022)

Release Date

2022-11-09

Peptides

Angiotensin-converting enzyme: A
Spike protein S1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Angiotensin-converting enzyme

Spike protein S1

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