SMTL ID : 7wvd.1

Crystal structure of H14 complexed with SIA28

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.39 Å

Oligo State

hetero-3-3-2-2-mer

Ligands

4 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 6 residues within 4Å: Chain A: T.37, K.279, N.290, V.291, G.306, S.307 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 6 residues within 4Å: Chain C: T.37, K.279, N.290, V.291, G.306, S.307 No protein-ligand interaction detected (PLIP) NAG-NAG.3: 7 residues within 4Å: Chain C: N.158, T.160, R.200, I.237 Chain E: S.212, P.214, R.215 2 PLIP interactions: 1 interactions with chain E, 1 interactions with chain C Hydrogen bonds: E:R.215 Hydrophobic interactions: C:I.237 NAG-NAG.4: 5 residues within 4Å: Chain E: K.279, N.290, V.291, G.306, S.307 No protein-ligand interaction detected (PLIP)

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.5: 4 residues within 4Å: Chain A: S.212 Chain E: N.158, T.160, I.237 4 PLIP interactions: 2 interactions with chain E, 2 interactions with chain A Hydrogen bonds: E:N.158, E:T.160, A:S.212, A:S.212

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, Y. et al., Structural basis for a human broadly neutralizing influenza A hemagglutinin stem-specific antibody including H17/18 subtypes. Nat Commun (2022)

Release Date

2023-01-18

Peptides

Hemagglutinin: ACE
Hemagglutinin: BDF
Heavy chain of SIA28: GI
Light chain of SIA28: HJ

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

E
E

B
B

D
D

F
F

G
G

I
I

H
H

J
J

Hemagglutinin

Hemagglutinin

Heavy chain of SIA28

Light chain of SIA28

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