- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-2-2-mer
- Ligands
- 2 x 85R: [(2~{R})-2-hexadecanoyloxy-3-[oxidanyl-[(2~{S},3~{S},5~{R},6~{S})-2,3,4,5,6-pentakis(oxidanyl)cyclohexyl]oxy-phosphoryl]oxy-propyl] hexadecanoate(Non-covalent)
- 10 x PGT: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE(Non-covalent)
PGT.2: 12 residues within 4Å:- Chain A: Q.14, D.15, V.18, I.19, W.22, I.59, V.60, A.63, H.65, S.68, F.69
- Ligands: PGT.3
10 PLIP interactions:10 interactions with chain A- Hydrophobic interactions: A:Q.14, A:V.18, A:I.19, A:I.59, A:V.60, A:A.63, A:H.65, A:F.69, A:F.69, A:F.69
PGT.3: 9 residues within 4Å:- Chain A: I.19, T.70, V.75, L.80, I.310
- Ligands: PGT.2, PGT.4, PGT.5, PGT.7
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:I.19, A:V.75, A:L.80
PGT.4: 16 residues within 4Å:- Chain A: F.78, Y.79, P.83, L.86, F.252, Y.256, I.273, M.302, L.303, S.306, A.307
- Chain B: G.249
- Ligands: PGT.3, PGT.5, PGT.6, PGT.7
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:P.83, A:L.86, A:Y.256, A:Y.256, A:I.273, A:L.303
PGT.5: 7 residues within 4Å:- Chain A: V.75, Y.79
- Ligands: PGT.3, PGT.4, PGT.6, PGT.7, PGT.10
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:V.75, A:Y.79
PGT.6: 12 residues within 4Å:- Chain A: Y.79, F.252, I.253, Y.256
- Chain B: D.15, P.16, I.19
- Ligands: PGT.4, PGT.5, PGT.9, PGT.10, PGT.12
5 PLIP interactions:2 interactions with chain B, 3 interactions with chain A- Hydrophobic interactions: B:D.15, B:I.19, A:F.252, A:Y.256, A:Y.256
PGT.7: 14 residues within 4Å:- Chain A: D.15, P.16, I.19, M.302
- Chain B: Y.79, F.252, I.253, Y.256, L.303
- Ligands: PGT.3, PGT.4, PGT.5, PGT.10, PGT.12
8 PLIP interactions:5 interactions with chain B, 3 interactions with chain A- Hydrophobic interactions: B:Y.79, B:F.252, B:Y.256, B:Y.256, B:L.303, A:D.15, A:P.16, A:I.19
PGT.9: 8 residues within 4Å:- Chain B: I.19, V.75, L.80, I.310
- Ligands: PGT.6, PGT.10, PGT.11, PGT.12
6 PLIP interactions:6 interactions with chain B- Hydrophobic interactions: B:I.19, B:I.19, B:V.75, B:V.75, B:L.80, B:I.310
PGT.10: 7 residues within 4Å:- Chain B: V.75, Y.79
- Ligands: PGT.5, PGT.6, PGT.7, PGT.9, PGT.12
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:V.75, B:Y.79, B:Y.79
PGT.11: 10 residues within 4Å:- Chain B: Q.14, D.15, V.18, I.59, V.60, H.65, S.68, F.69, F.314
- Ligands: PGT.9
8 PLIP interactions:8 interactions with chain B- Hydrophobic interactions: B:V.18, B:I.59, B:V.60, B:H.65, B:F.69, B:F.69, B:F.69, B:F.314
PGT.12: 13 residues within 4Å:- Chain B: Y.79, P.82, P.83, L.86, Y.256, I.273, M.302, L.303, S.306
- Ligands: PGT.6, PGT.7, PGT.9, PGT.10
6 PLIP interactions:6 interactions with chain B- Hydrophobic interactions: B:P.82, B:P.83, B:L.86, B:Y.256, B:I.273, B:L.303
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Dong, Y. et al., Structure of a human NHE3-CHP1 complex in the autoinhibited state. Sci Adv (2022)
- Release Date
- 2022-04-20
- Peptides
- Sodium/hydrogen exchanger 3: AB
Calcineurin B homologous protein 1: CD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-2-2-mer
- Ligands
- 2 x 85R: [(2~{R})-2-hexadecanoyloxy-3-[oxidanyl-[(2~{S},3~{S},5~{R},6~{S})-2,3,4,5,6-pentakis(oxidanyl)cyclohexyl]oxy-phosphoryl]oxy-propyl] hexadecanoate(Non-covalent)
- 10 x PGT: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Dong, Y. et al., Structure of a human NHE3-CHP1 complex in the autoinhibited state. Sci Adv (2022)
- Release Date
- 2022-04-20
- Peptides
- Sodium/hydrogen exchanger 3: AB
Calcineurin B homologous protein 1: CD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D - Membrane
-
We predict this structure to be a membrane protein.