SMTL ID : 7x6y.1

TRIM7 in complex with C-terminal peptide of NSP5

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.39 Å

Oligo State

monomer

Ligands

1 x CYS- SER- GLY- VAL- THR- PHE- GLN: peptide(Non-covalent)

CYS-SER-GLY-VAL-THR-PHE-GLN.1: 15 residues within 4Å: Chain A: T.45, N.46, T.47, R.48, G.71, W.72, A.73, L.86, F.89, Q.99, N.101, S.162, V.163, C.164, S.165 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:T.45, A:A.73, A:L.86, A:L.86, A:F.89 Hydrogen bonds: A:N.46, A:T.47, A:G.71, A:Q.99, A:N.101, A:S.162, A:C.164 Water bridges: A:N.101, A:S.165 Salt bridges: A:R.48

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liang, X. et al., A C-terminal glutamine recognition mechanism revealed by E3 ligase TRIM7 structures. Nat.Chem.Biol. (2022)

Release Date

2022-08-10

Peptides

E3 ubiquitin-protein ligase TRIM7: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E3 ubiquitin-protein ligase TRIM7

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