SMTL ID : 7x7v.1

Cryo-EM structure of SARS-CoV spike protein in complex with three nAbs X01, X10 and X17

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-1-mer

Ligands

2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 5 residues within 4Å: Chain G: F.6, F.10, N.11, V.35 Ligands: NAG-NAG.2 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 4 residues within 4Å: Chain G: N.38, T.40, F.41 Ligands: NAG-NAG.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xiong, H. et al., The neutralizing breadth of antibodies targeting diverse conserved epitopes between SARS-CoV and SARS-CoV-2. Proc.Natl.Acad.Sci.USA (2022)

Release Date

2022-08-17

Peptides

X10 light chain: A
X10 heavy chain: B
X17 light chain: C
X17 heavy chain: D
X01 light chain: E
X01 heavy chain: F
Spike protein S1: G

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

C
F

D
A

E
D

F
C

G
E

X10 light chain

X10 heavy chain

X17 light chain

X17 heavy chain

X01 light chain

X01 heavy chain

Spike protein S1

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