SMTL ID : 7x9w.1

Sulfur Oxygenase Reductase from Acidianus ambivalens

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-24-mer

Ligands

24 x FE: FE (III) ION(Non-covalent)

FE.1: 3 residues within 4Å: Chain A: H.85, H.89, E.113 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.85, A:H.89, A:E.113, A:E.113, H2O.1 FE.2: 3 residues within 4Å: Chain B: H.85, H.89, E.113 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.85, B:H.89, B:E.113, B:E.113, H2O.1 FE.3: 3 residues within 4Å: Chain C: H.85, H.89, E.113 5 PLIP interactions: 4 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:H.85, C:H.89, C:E.113, C:E.113, H2O.1 FE.4: 3 residues within 4Å: Chain D: H.85, H.89, E.113 5 PLIP interactions: 4 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:H.85, D:H.89, D:E.113, D:E.113, H2O.1 FE.5: 3 residues within 4Å: Chain E: H.85, H.89, E.113 5 PLIP interactions: 4 interactions with chain E, 1 Ligand-Water interactions Metal complexes: E:H.85, E:H.89, E:E.113, E:E.113, H2O.1 FE.6: 3 residues within 4Å: Chain F: H.85, H.89, E.113 5 PLIP interactions: 4 interactions with chain F, 1 Ligand-Water interactions Metal complexes: F:H.85, F:H.89, F:E.113, F:E.113, H2O.1 FE.7: 3 residues within 4Å: Chain G: H.85, H.89, E.113 5 PLIP interactions: 4 interactions with chain G, 1 Ligand-Water interactions Metal complexes: G:H.85, G:H.89, G:E.113, G:E.113, H2O.1 FE.8: 3 residues within 4Å: Chain H: H.85, H.89, E.113 5 PLIP interactions: 4 interactions with chain H, 1 Ligand-Water interactions Metal complexes: H:H.85, H:H.89, H:E.113, H:E.113, H2O.1 FE.9: 3 residues within 4Å: Chain I: H.85, H.89, E.113 5 PLIP interactions: 4 interactions with chain I, 1 Ligand-Water interactions Metal complexes: I:H.85, I:H.89, I:E.113, I:E.113, H2O.1 FE.10: 3 residues within 4Å: Chain J: H.85, H.89, E.113 5 PLIP interactions: 4 interactions with chain J, 1 Ligand-Water interactions Metal complexes: J:H.85, J:H.89, J:E.113, J:E.113, H2O.1 FE.11: 3 residues within 4Å: Chain K: H.85, H.89, E.113 5 PLIP interactions: 4 interactions with chain K, 1 Ligand-Water interactions Metal complexes: K:H.85, K:H.89, K:E.113, K:E.113, H2O.1 FE.12: 3 residues within 4Å: Chain L: H.85, H.89, E.113 5 PLIP interactions: 4 interactions with chain L, 1 Ligand-Water interactions Metal complexes: L:H.85, L:H.89, L:E.113, L:E.113, H2O.1 FE.13: 3 residues within 4Å: Chain M: H.85, H.89, E.113 5 PLIP interactions: 4 interactions with chain M, 1 Ligand-Water interactions Metal complexes: M:H.85, M:H.89, M:E.113, M:E.113, H2O.1 FE.14: 3 residues within 4Å: Chain N: H.85, H.89, E.113 5 PLIP interactions: 4 interactions with chain N, 1 Ligand-Water interactions Metal complexes: N:H.85, N:H.89, N:E.113, N:E.113, H2O.2 FE.15: 3 residues within 4Å: Chain O: H.85, H.89, E.113 5 PLIP interactions: 4 interactions with chain O, 1 Ligand-Water interactions Metal complexes: O:H.85, O:H.89, O:E.113, O:E.113, H2O.2 FE.16: 3 residues within 4Å: Chain P: H.85, H.89, E.113 5 PLIP interactions: 4 interactions with chain P, 1 Ligand-Water interactions Metal complexes: P:H.85, P:H.89, P:E.113, P:E.113, H2O.2 FE.17: 3 residues within 4Å: Chain Q: H.85, H.89, E.113 5 PLIP interactions: 4 interactions with chain Q, 1 Ligand-Water interactions Metal complexes: Q:H.85, Q:H.89, Q:E.113, Q:E.113, H2O.2 FE.18: 3 residues within 4Å: Chain R: H.85, H.89, E.113 5 PLIP interactions: 4 interactions with chain R, 1 Ligand-Water interactions Metal complexes: R:H.85, R:H.89, R:E.113, R:E.113, H2O.2 FE.19: 3 residues within 4Å: Chain S: H.85, H.89, E.113 5 PLIP interactions: 4 interactions with chain S, 1 Ligand-Water interactions Metal complexes: S:H.85, S:H.89, S:E.113, S:E.113, H2O.2 FE.20: 3 residues within 4Å: Chain T: H.85, H.89, E.113 5 PLIP interactions: 4 interactions with chain T, 1 Ligand-Water interactions Metal complexes: T:H.85, T:H.89, T:E.113, T:E.113, H2O.2 FE.21: 3 residues within 4Å: Chain U: H.85, H.89, E.113 5 PLIP interactions: 4 interactions with chain U, 1 Ligand-Water interactions Metal complexes: U:H.85, U:H.89, U:E.113, U:E.113, H2O.2 FE.22: 3 residues within 4Å: Chain V: H.85, H.89, E.113 5 PLIP interactions: 4 interactions with chain V, 1 Ligand-Water interactions Metal complexes: V:H.85, V:H.89, V:E.113, V:E.113, H2O.2 FE.23: 3 residues within 4Å: Chain W: H.85, H.89, E.113 5 PLIP interactions: 4 interactions with chain W, 1 Ligand-Water interactions Metal complexes: W:H.85, W:H.89, W:E.113, W:E.113, H2O.2 FE.24: 3 residues within 4Å: Chain X: H.85, H.89, E.113 5 PLIP interactions: 4 interactions with chain X, 1 Ligand-Water interactions Metal complexes: X:H.85, X:H.89, X:E.113, X:E.113, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sobhy, M.A. et al., Cryo-electron structures of the extreme thermostable enzymes Sulfur Oxygenase Reductase and Lumazine Synthase. Plos One (2022)

Release Date

2022-10-12

Peptides

Sulfur oxygenase/reductase: ABCDEFGHIJKLMNOPQRSTUVWX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
I

J
J

K
K

L
L

M
M

N
N

O
O

P
P

Q
Q

R
R

S
S

T
T

U
U

V
V

W
W

X
X

Sulfur oxygenase/reductase