SMTL ID : 7xbc.1

The 0.92 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with lignoceric acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 0.92 Å

Oligo State

monomer

Ligands

1 x BZV: tetracosanoic acid(Non-covalent)

BZV.1: 18 residues within 4Å: Chain A: F.17, Y.20, M.21, T.30, A.34, T.37, P.39, T.54, F.58, K.59, T.61, A.76, D.77, R.79, L.105, L.116, R.127, Y.129 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:F.17, A:Y.20, A:T.30, A:A.34, A:T.37, A:T.54, A:F.58, A:K.59, A:T.61, A:A.76, A:D.77, A:L.105 Hydrogen bonds: A:Y.129 Salt bridges: A:R.127

1 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)

1PE.2: 8 residues within 4Å: Chain A: K.10, L.11, V.12, D.13, S.35, M.36, T.37, K.38 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.10, A:K.38 Water bridges: A:S.14, A:K.38

1 x GLP: 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose(Non-covalent)

GLP.3: 6 residues within 4Å: Chain A: K.59, N.60, T.74, T.75, A.76, D.78 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:N.60, A:T.74, A:T.74 Water bridges: A:N.60, A:T.74 Salt bridges: A:K.59

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sugiyama, S. et al., The 0.92 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with lignoceric acid. To Be Published

Release Date

2023-03-29

Peptides

Fatty acid-binding protein, heart: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fatty acid-binding protein, heart

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