SMTL ID : 7xbf.2 (1 other biounit)

The complex structure of RshSTT182/200 RBD-insert2 bound to human ACE2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.51 Å

Oligo State

hetero-1-1-mer

Ligands

5 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 5 residues within 4Å: Chain A: N.36, T.38, E.40, N.41, Q.323 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.36, A:E.40 NAG.2: 2 residues within 4Å: Chain A: K.9, N.73 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.9 NAG.3: 3 residues within 4Å: Chain A: K.292, N.305, W.311 No protein-ligand interaction detected (PLIP) NAG.4: 4 residues within 4Å: Chain A: S.403, D.526, S.528, N.529 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.403, A:S.403, A:N.529 NAG.6: 2 residues within 4Å: Chain B: F.44, N.45 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:F.44 Hydrogen bonds: B:N.45

1 x ZN: ZINC ION(Non-covalent)

ZN.5: 4 residues within 4Å: Chain A: H.357, E.358, H.361, E.385 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.357, A:H.361, A:E.385

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hu, Y. et al., Host range and structural analysis of bat-origin RshSTT182/200 coronavirus binding to human ACE2 and its animal orthologs. Embo J. (2023)

Release Date

2023-01-11

Peptides

Processed angiotensin-converting enzyme 2: A
RshSTT182/200 coronavirus receptor binding domain insert2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Processed angiotensin-converting enzyme 2

RshSTT182/200 coronavirus receptor binding domain insert2

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