SMTL ID : 7xbh.1

The complex structure of RshSTT182/200 RBD bound to human ACE2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.02 Å

Oligo State

hetero-1-1-mer

Ligands

5 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 1 residues within 4Å: Chain A: N.25 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.25 NAG.2: 4 residues within 4Å: Chain B: Q.64, Q.84, Q.85, N.86 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:Q.84 Hydrogen bonds: B:Q.64, B:N.86, B:N.86 NAG.3: 3 residues within 4Å: Chain B: K.9, N.73, V.76 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:K.9 NAG.4: 5 residues within 4Å: Chain B: K.399, S.403, D.526, S.528, N.529 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.399, B:N.529 NAG.5: 3 residues within 4Å: Chain B: N.36, E.40, Q.323 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.36, B:E.40

1 x ZN: ZINC ION(Non-covalent)

ZN.6: 4 residues within 4Å: Chain B: H.357, E.358, H.361, E.385 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.357, B:H.361, B:E.385, B:E.385, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hu, Y. et al., Host range and structural analysis of bat-origin RshSTT182/200 coronavirus binding to human ACE2 and its animal orthologs. Embo J. (2023)

Release Date

2023-01-11

Peptides

RshSTT182/200 coronavirus receptor binding domain: A
Processed angiotensin-converting enzyme 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

RshSTT182/200 coronavirus receptor binding domain

Processed angiotensin-converting enzyme 2