SMTL ID : 7xe0.1

Cryo-EM structure of plant NLR Sr35 resistosome

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-5-5-mer

Ligands

5 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.1: 16 residues within 4Å: Chain A: R.167, L.178, V.179, I.181, G.212, G.213, G.215, K.216, T.217, T.218, R.321, L.350, P.381, L.382, I.385, I.426 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:V.179, A:V.179, A:G.212, A:G.212, A:G.215, A:K.216, A:T.217, A:T.217, A:T.218, A:T.218 Salt bridges: A:R.167, A:R.167, A:K.216, A:K.216, A:K.216, A:R.321 ATP.2: 15 residues within 4Å: Chain C: R.167, L.178, V.179, G.212, G.213, G.215, K.216, T.217, T.218, R.321, L.350, P.381, L.382, I.385, I.426 16 PLIP interactions: 16 interactions with chain C Hydrogen bonds: C:V.179, C:V.179, C:G.212, C:G.212, C:G.215, C:K.216, C:T.217, C:T.217, C:T.218, C:T.218 Salt bridges: C:R.167, C:R.167, C:K.216, C:K.216, C:K.216, C:R.321 ATP.3: 15 residues within 4Å: Chain D: R.167, L.178, V.179, G.212, G.213, G.215, K.216, T.217, T.218, R.321, L.350, P.381, L.382, I.385, I.426 16 PLIP interactions: 16 interactions with chain D Hydrogen bonds: D:V.179, D:V.179, D:G.212, D:G.212, D:G.215, D:K.216, D:T.217, D:T.217, D:T.218, D:T.218 Salt bridges: D:R.167, D:R.167, D:K.216, D:K.216, D:K.216, D:R.321 ATP.4: 15 residues within 4Å: Chain E: R.167, L.178, V.179, G.212, G.213, G.215, K.216, T.217, T.218, R.321, L.350, P.381, L.382, I.385, I.426 15 PLIP interactions: 15 interactions with chain E Hydrogen bonds: E:V.179, E:V.179, E:G.212, E:G.212, E:G.215, E:K.216, E:T.217, E:T.217, E:T.218, E:T.218 Salt bridges: E:R.167, E:R.167, E:K.216, E:K.216, E:R.321 ATP.5: 15 residues within 4Å: Chain F: R.167, L.178, V.179, G.212, G.213, G.215, K.216, T.217, T.218, R.321, L.350, P.381, L.382, I.385, I.426 15 PLIP interactions: 15 interactions with chain F Hydrogen bonds: F:V.179, F:V.179, F:G.212, F:G.212, F:G.215, F:K.216, F:T.217, F:T.217, F:T.218, F:T.218 Salt bridges: F:R.167, F:R.167, F:K.216, F:K.216, F:R.321

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhao, Y.B. et al., Pathogen effector AvrSr35 triggers Sr35 resistosome assembly via a direct recognition mechanism. Sci Adv (2022)

Release Date

2022-09-28

Peptides

Sr35: ACDEF
AvrSr35: BGHIJ

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

D
E

E
G

F
I

B
B

G
D

H
F

I
H

J
J

Sr35

AvrSr35

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